apptainer
Installed version : 1.4.1 Provides : apptainer, singularity Site Environment setup: Appendix
Category: Softs
FSL – FMRIB
2to3, 2to3-3.12, acyclic, addr2line, adig, aff2rigid, ahost, AnatomicalAverage, androiddeployqt6, annotate, aomdec, aomenc, applytopup, applywarp, ApplyXFM, applyxfm4D, ApplyXFM_gui, ar, as, aserver, asl_calib, asl_file, asl_gui, asl_mfree, asl_reg, asn1Coding, asn1Decoding, asn1Parser, assistant, assistant6,… Read more »
ANTs
AddNoiseToImage CreateTiledMosaic ANTS CreateWarpedGridImage antsAffineInitializer DenoiseImage antsAI DeNrrd antsAlignOrigin ExtractRegionFromImage antsApplyTransforms ExtractRegionFromImageByMask antsApplyTransformsToPoints ExtractSliceFromImage antsASLProcessing.sh FitBSplineToPoints antsAtroposN4.sh etConnectedComponentsFeatureImages antsBOLDNetworkAnalysis.R ImageCompare antsBrainExtraction.sh ImageIntensityStatistics antsCorticalThickness.sh ImageMath ANTSIntegrateVectorField ImageSetStatistics ANTSIntegrateVelocityField iMath antsIntermodalityIntrasubject.sh KellyKapowski… Read more »
R (Stat)
To install some « packages » as user mkdir -p ~/R/libs -> to create directory in your user spaceand do “.libPaths(“~/R/libs”)” in R (interractive mode)or/and put “.libPaths(“~/R/libs”)” in ~/.Rprofile to… Read more »
Matlab
Link explaining the ‘Campus License’ Description MATLAB, an acronym for “MATrix LABoratory,” is a numerical computing and programming software developed by MathWorks. It is widely used in the fields of… Read more »
Sage
Description Sage provides a wide range of tools for performing symbolic and numerical computations, solving problems in algebra, differential calculus, number theory, and much more. Sage integrates multiple systems for… Read more »
Guix
Guix is a functional package manager and configuration management system for the GNU operating system. It enables the reproducible installation and management of software through immutable packages and declarative configuration… Read more »
Gromacs
Last installed version : 2023.3 Description GROMACS, which stands for “GROningen MAchine for Chemical Simulations,” is widely used molecular simulation software in the fields of computational chemistry, biochemistry, and biophysics…. Read more »